Pairwise likelihood estimation for confirmatory factor analysis models with categorical variables and data that are missing at random

Methods for the treatment of item non-response in attitudinal scales and in large-scale assessments under the pairwise likelihood (PL) estimation framework and under a missing at random (MAR) mechanism are proposed. Under a full information likelihood estimation framework and MAR, ignorability of the missing data mechanism does not lead to biased estimates. However, this is not the case for pseudo-likelihood approaches such as the PL. We develop and study the performance of three strategies for incorporating missing values into confirmatory factor analysis under the PL framework, the complete-pairs (CP), the available-cases (AC) and the doubly robust (DR) approaches. The CP and AC require only a model for the observed data and standard errors are easy to compute. Doubly-robust versions of the PL estimation require a predictive model for the missing responses given the observed ones and are computationally more demanding than the AC and CP. A simulation study is used to compare the proposed methods. The proposed methods are employed to analyze the UK data on numeracy and literacy collected as part of the OECD Survey of Adult Skills.     

计划缺失设计——通过有意缺失让研究更高效

缺失值是社会科学研究中非常普遍的现象。全息极大似然估计和多重插补是目前处理缺失值最有效的方法。计划缺失设计利用特殊的实验设计有意产生缺失值, 再用现代的缺失值处理方法来完成统计分析, 获得无偏的统计结果。计划缺失设计可用于横断面调查减少(或增加)问卷长度和纵向调查减少测量次数, 也可用于提高测量有效性。常用的计划缺失设计有三式设计和两种方法测量。     

Robust inference with binary data

In this paper robustness properties of the maximum likelihood estimator (MLE) and several robust estimators for the logistic regression model when the responses are binary are analysed. It is found that the MLE and the classical Rao's score test can be misleading in the presence of model misspecification which in the context of logistic regression means either misclassification's errors in the responses, or extreme data points in the design space. A general framework for robust estimation and testing is presented and a robust estimator as well as a robust testing procedure are presented. It is shown that they are less influenced by model misspecifications than their classical counterparts. They are finally applied to the analysis of binary data from a study on breastfeeding.The author is partially supported by the Swiss National Science Foundation. She would like to thank Rand Wilcox, Eva Cantoni and Elvezio Ronchetti for their helpful comments on earlier versions of the paper, as well as Stephane Heritier for providing the routine to compute the OBRE.     

Factor analysis with (mixed) observed and latent variables in the exponential family

We develop a general approach to factor analysis that involves observed and latent variables that are assumed to be distributed in the exponential family. This gives rise to a number of factor models not considered previously and enables the study of latent variables in an integrated methodological framework, rather than as a collection of seemingly unrelated special cases. The framework accommodates a great variety of different measurement scales and accommodates cases where different latent variables have different distributions. The models are estimated with the method of simulated likelihood, which allows for higher dimensional factor solutions to be estimated than heretofore. The models are illustrated on synthetic data. We investigate their performance when the distribution of the latent variables is mis-specified and when part of the observations are missing. We study the properties of the simulation estimators relative to maximum likelihood estimation with numerical integration. We provide an empirical application to the analysis of attitudes.     

The derivation of some tests for the rasch model from the multinomial distribution

The present paper is concerned with testing the fit of the Rasch model. It is shown that this can be achieved by constructing functions of the data, on which model tests can be based that have power against specific model violations. It is shown that the asymptotic distribution of these tests can be derived by using the theoretical framework of testing model fit in general multinomial and product-multinomial models. The model tests are presented in two versions: one that can be used in the context of marginal maximum likelihood estimation and one that can be applied in the context of conditional maximum likelihood estimation.I am indebted to Norman Verhelst and Niels Veldhuijzen for their helpful comments. Requests for reprints should be sent to Cees A. W. Glas, Cito, PO Box 1034, 6801 MG Arnhem, THE NETHERLANDS.     

Pairwise Likelihood Ratio Tests and Model Selection Criteria for Structural Equation Models with Ordinal Variables

Correlated multivariate ordinal data can be analysed with structural equation models. Parameter estimation has been tackled in the literature using limited-information methods including three-stage least squares and pseudo-likelihood estimation methods such as pairwise maximum likelihood estimation. In this paper, two likelihood ratio test statistics and their asymptotic distributions are derived for testing overall goodness-of-fit and nested models, respectively, under the estimation framework of pairwise maximum likelihood estimation. Simulation results show a satisfactory performance of type I error and power for the proposed test statistics and also suggest that the performance of the proposed test statistics is similar to that of the test statistics derived under the three-stage diagonally weighted and unweighted least squares. Furthermore, the corresponding, under the pairwise framework, model selection criteria, AIC and BIC, show satisfactory results in selecting the right model in our simulation examples. The derivation of the likelihood ratio test statistics and model selection criteria under the pairwise framework together with pairwise estimation provide a flexible framework for fitting and testing structural equation models for ordinal as well as for other types of data. The test statistics derived and the model selection criteria are used on data on ‘trust in the police’ selected from the 2010 European Social Survey. The proposed test statistics and the model selection criteria have been implemented in the R package lavaan.     

Modeling Incomplete Longitudinal Substance Use Data Using Latent Variable Growth Curve Methodology

Longitudinal data sets typically suffer from attrition and other forms of missing data. When this common problem occurs, several researchers have demonstrated that correct maximum likelihood estimation with missing data can be obtained under mild assumptions concerning the missing data mechanism. With reasonable substantive theory, a mixture of cross-sectional and longitudinal methods developed within multiple-group structural equation modeling can provide a strong basis for inference about developmental change. Using an approach to the analysis of missing data, the present study investigated developmental trends in adolescent (N = 759) alcohol, marijuana, and cigarette use across a 5-year period using multiple-group latent growth modeling. An associative model revealed that common developmental trends existed for all three substances. Age and gender were included in the model as predictors of initial status and developmental change. Findings discuss the utility of latent variable structural equation modeling techniques and missing data approaches in the study of developmental change.     

Missing data techniques for structural equation modeling

As with other statistical methods, missing data often create major problems for the estimation of structural equation models (SEMs). Conventional methods such as listwise or pairwise deletion generally do a poor job of using all the available information. However, structural equation modelers are fortunate that many programs for estimating SEMs now have maximum likelihood methods for handling missing data in an optimal fashion. In addition to maximum likelihood, this article also discusses multiple imputation. This method has statistical properties that are almost as good as those for maximum likelihood and can be applied to a much wider array of models and estimation methods.     

Simple imputation methods versus direct likelihood analysis for missing item scores in multilevel educational data

Missing data, such as item responses in multilevel data, are ubiquitous in educational research settings. Researchers in the item response theory (IRT) context have shown that ignoring such missing data can create problems in the estimation of the IRT model parameters. Consequently, several imputation methods for dealing with missing item data have been proposed and shown to be effective when applied with traditional IRT models. Additionally, a nonimputation direct likelihood analysis has been shown to be an effective tool for handling missing observations in clustered data settings. This study investigates the performance of six simple imputation methods, which have been found to be useful in other IRT contexts, versus a direct likelihood analysis, in multilevel data from educational settings. Multilevel item response data were simulated on the basis of two empirical data sets, and some of the item scores were deleted, such that they were missing either completely at random or simply at random. An explanatory IRT model was used for modeling the complete, incomplete, and imputed data sets. We showed that direct likelihood analysis of the incomplete data sets produced unbiased parameter estimates that were comparable to those from a complete data analysis. Multiple-imputation approaches of the two-way mean and corrected item mean substitution methods displayed varying degrees of effectiveness in imputing data that in turn could produce unbiased parameter estimates. The simple random imputation, adjusted random imputation, item means substitution, and regression imputation methods seemed to be less effective in imputing missing item scores in multilevel data settings.     

Using mixture models with known class membership to address incomplete covariance structures in multiple‐group growth models

Multi‐group latent growth modelling in the structural equation modelling framework has been widely utilized for examining differences in growth trajectories across multiple manifest groups. Despite its usefulness, the traditional maximum likelihood estimation for multi‐group latent growth modelling is not feasible when one of the groups has no response at any given data collection point, or when all participants within a group have the same response at one of the time points. In other words, multi‐group latent growth modelling requires a complete covariance structure for each observed group. The primary purpose of the present study is to show how to circumvent these data problems by developing a simple but creative approach using an existing estimation procedure for growth mixture modelling. A Monte Carlo simulation study was carried out to see whether the modified estimation approach provided tangible results and to see how these results were comparable to the standard multi‐group results. The proposed approach produced results that were valid and reliable under the mentioned problematic data conditions. We also present a real data example and demonstrate that the proposed estimation approach can be used for the chi‐square difference test to check various types of measurement invariance as conducted in a standard multi‐group analysis.     

Methods for Mediation Analysis with Missing Data

Despite wide applications of both mediation models and missing data techniques, formal discussion of mediation analysis with missing data is still rare. We introduce and compare four approaches to dealing with missing data in mediation analysis including listwise deletion, pairwise deletion, multiple imputation (MI), and a two-stage maximum likelihood (TS-ML) method. An R package bmem is developed to implement the four methods for mediation analysis with missing data in the structural equation modeling framework, and two real examples are used to illustrate the application of the four methods. The four methods are evaluated and compared under MCAR, MAR, and MNAR missing data mechanisms through simulation studies. Both MI and TS-ML perform well for MCAR and MAR data regardless of the inclusion of auxiliary variables and for AV-MNAR data with auxiliary variables. Although listwise deletion and pairwise deletion have low power and large parameter estimation bias in many studied conditions, they may provide useful information for exploring missing mechanisms.     

概化理论缺失数据方差分量估计

各种心理调查、心理实验中, 数据的缺失随处可见。由于数据缺失, 给概化理论分析非平衡数据的方差分量带来一系列问题。基于概化理论框架下, 运用Matlab 7.0软件, 自编程序模拟产生随机双面交叉设计p×i×r缺失数据, 比较和探讨公式法、REML法、拆分法和MCMC法在估计各个方差分量上的性能优劣。结果表明：(1) MCMC方法估计随机双面交叉设计p×i×r缺失数据方差分量, 较其它3种方法表现出更强的优势; (2) 题目和评分者是缺失数据方差分量估计重要的影响因素。     

An item response tree model with not-all-distinct end nodes for non-response modelling

The non-response model in Knott et al. (1991, Statistician, 40, 217) can be represented as a tree model with one branch for response/non-response and another branch for correct/incorrect response, and each branch probability is characterized by an item response theory model. In the model, it is assumed that there is only one source of non-responses. However, in questionnaires or educational tests, non-responses might come from different sources, such as test speededness, inability to answer, lack of motivation, and sensitive questions. To better accommodate such more realistic underlying mechanisms, we propose a a tree model with four end nodes, not all distinct, for non-response modelling. The Laplace-approximated maximum likelihood estimation for the proposed model is suggested. The validation of the proposed estimation procedure and the advantage of the proposed model over traditional methods are demonstrated in simulations. For illustration, the methodologies are applied to data from the 2012 Programme for International Student Assessment (PISA). The analysis shows that the proposed tree model has a better fit to PISA data than other existing models, providing a useful tool to distinguish the sources of non-responses.     

Analysis of Interactions and Nonlinear Effects with Missing Data: A Factored Regression Modeling Approach Using Maximum Likelihood Estimation

Abstract

When estimating multiple regression models with incomplete predictor variables, it is necessary to specify a joint distribution for the predictor variables. A convenient assumption is that this distribution is a multivariate normal distribution, which is also the default in many statistical software packages. This distribution will in general be misspecified if predictors with missing data have nonlinear effects (e.g., x²) or are included in interaction terms (e.g., x·z). In the present article, we introduce a factored regression modeling approach for estimating regression models with missing data that is based on maximum likelihood estimation. In this approach, the model likelihood is factorized into a part that is due to the model of interest and a part that is due to the model for the incomplete predictors. In three simulation studies, we showed that the factored regression modeling approach produced valid estimates of interaction and nonlinear effects in regression models with missing values on categorical or continuous predictor variables under a broad range of conditions. We developed the R package mdmb, which facilitates a user-friendly application of the factored regression modeling approach, and present a real-data example that illustrates the flexibility of the software.     

Multilevel SEM with random slopes in discrete data using the pairwise maximum likelihood

Pairwise maximum likelihood (PML) estimation is a promising method for multilevel models with discrete responses. Multilevel models take into account that units within a cluster tend to be more alike than units from different clusters. The pairwise likelihood is then obtained as the product of bivariate likelihoods for all within-cluster pairs of units and items. In this study, we investigate the PML estimation method with computationally intensive multilevel random intercept and random slope structural equation models (SEM) in discrete data. In pursuing this, we first reconsidered the general ‘wide format’ (WF) approach for SEM models and then extend the WF approach with random slopes. In a small simulation study we the determine accuracy and efficiency of the PML estimation method by varying the sample size (250, 500, 1000, 2000), response scales (two-point, four-point), and data-generating model (mediation model with three random slopes, factor model with one and two random slopes). Overall, results show that the PML estimation method is capable of estimating computationally intensive random intercept and random slopes multilevel models in the SEM framework with discrete data and many (six or more) latent variables with satisfactory accuracy and efficiency. However, the condition with 250 clusters combined with a two-point response scale shows more bias.     

A Two-Tier Full-Information Item Factor Analysis Model with Applications

Motivated by Gibbons et al.’s (Appl. Psychol. Meas. 31:4–19, 2007) full-information maximum marginal likelihood item bifactor analysis for polytomous data, and Rijmen, Vansteelandt, and De Boeck’s (Psychometrika 73:167–182, 2008) work on constructing computationally efficient estimation algorithms for latent variable models, a two-tier item factor analysis model is developed in this research. The modeling framework subsumes standard multidimensional IRT models, bifactor IRT models, and testlet response theory models as special cases. Features of the model lead to a reduction in the dimensionality of the latent variable space, and consequently significant computational savings. An EM algorithm for full-information maximum marginal likelihood estimation is developed. Simulations and real data demonstrations confirm the accuracy and efficiency of the proposed methods. Three real data sets from a large-scale educational assessment, a longitudinal public health survey, and a scale development study measuring patient reported quality of life outcomes are analyzed as illustrations of the model’s broad range of applicability.     

2PLM下缺失数据处理方法及其比较

项目反应理论(IRT)是用于客观测量的现代教育与心理测量理论之一,广泛用于缺失数据十分常见的大尺度测验分析。IRT中两参数逻辑斯蒂克模型(2PLM)下仅有完全随机缺失机制下缺失反应和缺失能力处理的EM算法。本研究推导2PLM下缺失反应忽略的EM 算法,并提出随机缺失机制下缺失反应和缺失能力处理的EM算法和考虑能力估计和作答反应不确定性的多重借补法。研究显示：在各种缺失机制、缺失比例和测验设计下,缺失反应忽略的EM算法和多重借补法表现理想。